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El Nido to Bohol: 3 Ways to Get to Bohol from El Nido

Written by Felicia|Updated: 2025-04-21

Traveling from El Nido to Bohol is a scenic journey connecting two of the Philippines' most stunning tourist spots. El Nido, tucked in the northeast corner of Palawan, is famous for its crystal-clear lagoons, while Bohol, a gem in the central Visayas, offers a mix of adventure and relaxation.

Direct flight is the easiest way to travel from El Nido to Bohol. As of April 2025, El Nido Airport offers direct flights to Bohol’s Panglao International Airport once a day. Alternative, you can fly to Cebu, just 100 km from Bohol, and then take a 2-hour ferry. Another option is to transit through Manila for a connecting flight to Bohol.

In this El Nido to Bohol guide, Asia Odyssey Travel breaks down all three options, covering flight details, local transport, and the best things to do once you arrive.

Content Preview

  • triangleEl Nido to Bohol Distance with Map
  • trianglePlan A: Take Nonstop Flights from El Nido to Bohol (Once a Day)
  • trianglePlan B: Flight to Cebu + Ferry to Bohol
  • trianglePlan C: Take a Connecting Flight to Bohol via Manila
  • triangleHow to Plan a Tour in Bohol?
  • triangleExplore Bohol & Philippines with Asia Odyssey Travel: Hassle-free

El Nido to Bohol Distance with Map

El Nido is located in the northeast corner of Palawan. It’s the kind of place where you could easily lose track of time while island-hopping or lounging on the beach.

Bohol, located in the Central Visayas region, offers a different kind of charm. While El Nido is all about those breathtaking coastal views, Bohol delivers a mix of nature, culture, and adventure.

Bohol Philippines Map
El Nido to Bohol Map

The distance between El Nido and Bohol is around 400 km (250 miles), but since there are no direct ferries, you’ll need to take a flight, or a combination of a flight and a ferry, to make the trip. Let’s break down your best options:

Plan Route Travel Time Estimated Cost
Plan A: Nonstop Flight (Fastest & Easiest) El Nido → Panglao (Direct Flight) 1h 40m $72 – $126 (One-way)
Plan B: Flight to Cebu + Ferry to Bohol El Nido → Cebu (Flight) → Bohol (Ferry) 5-6 hours Flight: $54 – $90 (El Nido to Cebu)
Ferry: $8 – $12 (Cebu to Bohol)
Plan C: Connecting Flight via Manila El Nido → Manila (Flight) → Bohol (Flight) 5-7 hours $108 – $180 (Total for both flights)

Plan A: Take Nonstop Flights from El Nido to Bohol (Once a Day)

If you're looking for FASTEST WAY to get from El Nido to Bohol, a NONSTOP FLIGHT is your best choice. As of April 2025, Cebu Pacific operates one daily flight between these two tropical destinations.

Origin City (Airport Code) Arrival City(Airport Code) Flight Time Duration Operating Airlines
El Nido (ENI) Panglao (TAG) 12:55pm - 2:35pm 1h 40m Cebu Pacific

El Nido Airport (ENI) – Departure

El Nido Airport is small and simple, located about 4 km from the town center. It’s a no-frills airport with basic facilities, so arrive at least 1 hour before departure to check in. You can reach the airport via a 10-minute tricycle or van ride.

Panglao International Airport (TAG) - Arrival

After nearly 2-hour flying, you’ll land at Panglao International Airport in Panglao Island, southwestern part of Bohol. It’s a new airport and just about 10 minutes from the popular Alona Beach area. Taxis and ride-hailing services are available right outside, making it easy to start your Bohol adventure.

El Nido Airport
El Nido Airport
Bohol Airport
Bohol Airport

Plan B: Flight to Cebu + Ferry to Bohol

If the direct flight from El Nido to Bohol doesn’t fit your itinerary, you can fly to Cebu first, then take a ferry. Sure, it takes a bit longer time, but it gives you more options and flexibility. Plus, you get to enjoy a scenic ferry ride across the sea.

Step 1: Fly from El Nido to Cebu

Your journey starts with a 1.5-hour flight from El Nido Airport (ENI) to Mactan-Cebu International Airport (CEB). Cebu Pacific usually runs 1-2 flights a day, so it’s not too hard to find a seat.

Once you land in Cebu, you’ll need to head to Cebu Passenger Pier 1 for the ferry. The ride from the airport to the pier takes 40-60 minutes. Just grab a taxi or book a car through a ride-hailing app, the fare is about 400PHP.

Step 2: Take the Ferry from Cebu to Bohol

At Cebu Pier 1, you can catch a 2-hour fast ferry to Tagbilaran City Tourist Port in Bohol. Ferries run throughout the day from 6:00 AM to 6:00 PM, so there’s plenty of flexibility.

Cebu Port
Cebu Port
Tourist Class of Ferry
Tourist Class of Ferry

Once you arrive in Bohol, Alona Beach (aka the main tourist hub) is just a 30-40 minute drive away. Taxis and ride-hailing cars are easy to find right outside the port.

Related Article:Cebu to Bohol (Tagbilaran) Ferry: 2025 Schedule & Fare

Travel Time Estimate:

  • Flight: 1h 30m (El Nido to Cebu)
  • Transfer to Pier: 1h (Mactan Airport to Cebu Pier 1)
  • Ferry: 2h (Cebu to Bohol)

All in, you’re looking at about 5-6 hours of travel. It’s a bit more effort, but the ferry ride is a nice change of pace. And hey, having more flight options is always a win.

Plan C: Take a Connecting Flight to Bohol via Manila

If the direct flight doesn’t work out, here’s another solid option—flying to Bohol via Manila. It’s a bit longer, but with more flights available, it gives you way more flexibility. Let me break it down for you.

Manila Airport
Manila Airport
Bohol Tagbilaran Airport
Bohol Tagbilaran Airport

Step 1: Fly from El Nido to Manila

You’ll start by hopping on a flight from El Nido to Manila. It’s a quick 1 hour and 30 minutes. Air Swift usually handles this route with 3-5 daily flights, so finding a seat isn’t too tricky.

Just a heads-up: Manila’s airport is huge, and you might need to switch terminals for your next flight. Give yourself at least 2-3 hours between flights. Trust me, you’ll want the buffer.

Step 2: Fly from Manila to Bohol

Once you’re in Manila, it’s just another 1.5-hour flight to Panglao International Airport in Bohol. Both Cebu Pacific and Philippine Airlines fly this route several times a day, so you’ve got options.

How Long Will It Take?

  • El Nido to Manila flight: 1h 30m
  • Layover in Manila: 2-3 hours (just to be safe)
  • Manila to Bohol flight: 1h 30m

In total, you’re looking at 5-7 hours, depending on how smooth your transfer goes. It’s not the quickest route, but if the direct flight isn’t available, this is your next best bet.and honestly, it’s pretty straightforward.

Loboc River Cruise, Bohol
Loboc River Cruise, Bohol
Snorkeling at Balicasag Islands
Snorkeling at Balicasag Islands

How to Plan a Tour in Bohol?

After soaking in the stunning lagoons and beaches of El Nido, you might be craving some land-based adventures. Bohol is just the place for that. This island is a perfect mix of cultural landmarks, natural wonders, and marine life. Bohol is perfect for families, offering a balance of relaxation and adventure.

Usually, we suggest that spend one day in land and another day for the island-hopping.

Land Day Tour Route: Napaling Reef (sardine run) → Loboc River Cruise (buffet) → Bohol Tarsier Conservation Area (world’s tiniest primates) → Chocolate Hills

Related Article:Activities in Bohol: 13 Things to Do & Places to Visit

Island Hopping Day Tour Route: Panglao Island → Balicasag Island.

If you're lucky, you’ll catch dolphins playing in the waves, while sea turtles glide calmly beneath you.

If you’re feeling more adventurous, the Visayas Loop Tour is a popular option.

Visayas Loop Tour Route: Cebu (Cebu City) → Bohol (Panglao → Balicasag) → SiquijorDumaguete → Apo Island → Oslob → Cebu

Philippine Tarsier Sanctuary, Bohol
Philippine Tarsier Sanctuary, Bohol
Bohol Alona Beach
Bohol Alona Beach

Explore Bohol & Philippines with Asia Odyssey Travel: Hassle-free

Bohol is calling, and trust us, you don’t want to miss it. From the iconic Chocolate Hills to up-close encounters with tarsiers, from crystal-clear snorkeling spots to jungle river cruises, Bohol island is packed with adventure, relaxation, and everything in between. And the best part? You don’t have to figure it all out on your own.

At Asia Odyssey Travel, we make your Bohol adventure seamless, stress-free, and unforgettable. Whether you're planning a quick island escape or an extended Philippines adventure that includes Siquijor, Dumaguete, Palawan, or Boracay, we've got the perfect itinerary for you.

To suit every traveler’s needs, we provide:

10 Best Philippines Group Tours - Budget-friendly adventures, small group;

40+ Private Itineraries - Customized experiences beyond guidebook highlights.

Custom Bohol Tours - Bohol countryside tour to Chotolate Hills, island hopping tours to Balicasag.

Latest Travel Guides - Bohol Maps, Bohol Attractions, Bohol Itinerary, How to Get to Bohol, Cebu to Bohol, Manila to Bohol, El Nido to Bohol.

So, what’s next? Just send us a message, tell us what excites you, and we’ll make it happen. Your Bohol adventure is waiting, let’s make it unforgettable!

If you have any questions about this article, please contact us by submitting the following form and we'll immediately get back to you.

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